fig7

Benchmarking and optimizing microbiome-based bioinformatics workflow for non-invasive detection of intestinal tumors

Figure 7. Construction and validation performance analysis of the optimal machine learning pipeline. (A and B) Classification performance evaluations of CRC and ADA based on WGS data, respectively; (C and D) Evaluation results of CRC and ADA based on 16S data, respectively. Each sub-figure shows the ROC curves under three validation strategies: five-fold cross-validation (left), LODO validation (middle), and performance on an independent validation set (right). AT: Austria; CHN: China; DE: Germany; ITA: Italy; JPN: Japan; IND: India; FR: France; SPA: Spain; US: United States; WGS: whole genome sequencing; CRC: colorectal cancer; ADA: adenoma; 16S: 16S rRNA gene sequencing; AUC: area under the curve; LODO: Leave-One-Dataset-Out.

Microbiome Research Reports
ISSN 2771-5965 (Online)

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